Work on a Latex Document with Github and Overleaf
git
github
In the past I have written about coordinating a large document using multiple overleaf documents and Github repositories. In this post I will just layout the simpler case where we have a Latex document on Overleaf and we also want users to be able to work on it from Github and we want…
Custos authentication for JupyterHub
kubernetes
jetstream2
jupyterhub
Custos is a security middleware used to authenticate users to…
Deploy Dask Gateway with JupyterHub on Kubernetes
kubernetes
jetstream2
jupyterhub
dask
Updated 28 April 2022: switched to Dask Gateway 2022.4.0
Deploy Dask Gateway with JupyterHub on Kubernetes
kubernetes
jetstream
jupyterhub
dask
Tutorial OBSOLETE Please check the updated version of this tutorial.
Gateways 2020 paper about Kubernetes and JupyterHub on Jetstream
jupyterhub
jetstream
kubernetes
My paper…
Deploy Dask Gateway with JupyterHub on Kubernetes
kubernetes
cloudcomputing
jetstream
jupyterhub
dask
This tutorial is obsolete, please follow https://zonca.dev/2022/01/dask-gateway-jupyterhub.html
Handle white noise with healpy 2 partial sky coverage
cosmology
python
healpy
Simulate white noise maps and use hitmaps
Handle white noise with healpy 1 Full sky coverage
cosmology
python
healpy
Simulate white noise maps and use hitmaps
Setup HTTPS on Kubernetes with Letsencrypt
kubernetes
jetstream
jupyterhub
Updated in August 2022: Add patching script to run on master node
Kubernetes monitoring with Prometheus and Grafana
kubernetes
jetstream
jupyterhub
Updated September 2020
Kubernetes monitoring with Dashboard, Prometheus, and Grafana
kubernetes
jetstream
jupyterhub
Install with
helm
:
Deploy Pangeo on Kubernetes deployment on Jetstream created with Kubespray
kubernetes
jetstream
jupyterhub
The Pangeo collaboration for Big Data Geoscience maintains a helm chart with a prefigured JupyterHub deployment on Kubernetes which also supports launching private dask workers. This is very useful because the Jupyter…
PEARC18 Paper on Deploying Jupyterhub at scale on XSEDE
singularity
jetstream
jupyterhub
kubernetes
Bob Sinkovits and I are presenting a paper at PEARC18 about:
Launch a shared dask cluster in Kubernetes alongside JupyterHub on Jetstream
jupyterhub
jetstream
dask
Let’s assume we have already a Kubernetes deployment and have installed JupyterHub, see for example my previous tutorial on Jetstream. Now that users can login and access a Jupyter Notebook, we would also like to provide them more computing power for their interactive…
Install a BOINC server on Jetstream
jetstream
cloudcomputing
BOINC is the leading platform for volunteer computing.
Use the distributed file format Zarr on Jetstream Swift object storage
jupyter
jetstream
cloudcomputing
Updated again in January 2019
Install custom Python environment on Jupyter Notebooks at NERSC
jupyterhub
python
hpc
nersc
NERSC has…
Deploy scalable Jupyterhub with Kubernetes on Jetstream
jupyterhub
jetstream
cloudcomputing
The best infrastructure available to deploy Jupyterhub at scale…
Deploy scalable Jupyterhub on Docker Swarm mode
jupyterhub
jetstream
cloudcomputing
Jupyterhub genrally requires…
Deployment of Jupyterhub with Globus Auth to spawn Notebook on Comet in Singularity containers
jupyterhub
singularity
hpc
Follow the instructions at https://github.com/zonca/singularity-comet to build images from the
ubuntu_anaconda_jupyterhub.def
and centos_anaconda_jupyterhub.def
definition files, or use the containers I have…
Deploy Jupyterhub on a Supercomputer with SSH Authentication
python
jupyterhub
hpc
The best way to deploy Jupyterhub with an interface to a Supercomputer is through the use of
batchspawner
. I have a sample deployment explained in an older blog post: https://zonca.github.io/2017/02/sample-deployment-jupyterhub…
Planck CTP angular power spectrum ell binning
healpy
Planck released a binning of the angular power spectrum in the Explanatory supplement,
unfortunately the file is in PDF format, non easily machine-readable:
http://www.sciops.esa.int/wikiSI/planckpla/index.php?title=Frequency_maps_angular_power_spectra&instance=Pla…
unfortunately the file is in PDF format, non easily machine-readable:
http://www.sciops.esa.int/wikiSI/planckpla/index.php?title=Frequency_maps_angular_power_spectra&instance=Pla…
HEALPix map of the Earth using healpy
healpy
HEALPix maps can also be used to create equal-area pixelized maps of the Earth, RGB colors are not supported in healpy, so we need to convert the image to colorscale.
The best user case is for using spherical harmonic transforms, e.g. apply a smoothing filter, in this case HEALPix/healpy tools are really…
The best user case is for using spherical harmonic transforms, e.g. apply a smoothing filter, in this case HEALPix/healpy tools are really…
No matching items